Publications

Constantin Ahlmann-Eltze, Wolfgang Huber (2023). Comparison of transformations for single-cell RNA-seq data. Nature Methods.

Roman Doll, Michael Boutros, Fillip Port (2022). A temperature-tolerant CRISPR base editor mediates highly efficient and precise gene inactivation in vivo. bioRxiv.

Dan Feng, Yhe Liang, Zifan Wang, Jiaying Yao, Zan Yuan, Guihua Hu, Ruihong Qu, Shang Xie, Dongwei Li, Liwen Yang, Xinai Zhao, Yanfei Mao, Jan Lohmann, Xiaofeng Gu (2022). Chromatin accessibility illuminates single-cell regulatory dynamics of rice root tips. BMC Biology.

Britta Velten, Jana M. Braunger, Ricard Argelaguet, Damien Arnol, Jakob Wirbel, Danila Bredikhin, Georg Zeller, Oliver Stegle (2022). Identifying temporal and spatial patterns of variation from multimodal data using MEFISTO. Nat Methods 19, 179–186 (2022).

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Shivohum Bahuguna, Siamak Redhai, Jun Zhou, Tianyu Wang, Fillip Port, Michael Boutros (2021). Conditional CRISPR-Cas Genome Editing in Drosophila to Generate Intestinal Tumors. Cells.

Constantin Ahlmann-Eltze, Wolfgang Huber (2021). Transformation and Preprocessing of Single-Cell RNA-Seq Data. bioRxiv.

Qing Liu, Zhe Liang, Dan Feng, Sanjie Jiang, Yifan Wang, Zhuoying Du, Ruoxi Li, Guihua Hu, Pingxian Zhang, Yanfei Ma, Jan Lohmann, Xiaofeng Gu (2021). Transcriptional landscape of rice roots at the single-cell resolution. Molecular Plant.

Siamak Redhai, Michael Boutros (2021). The Role of Organelles in Intestinal Function, Physiology, and Disease. Trends in Cell Biology.

Constantin Ahlmann-Eltze, Wolfgang Huber (2020). glmGamPoi: fitting Gamma-Poisson generalized linear models on single cell count data. Bioinformatics, Volume 36, Issue 24, 15 December 2020, Pages 5701–5702.

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Fillip Port, Maja Starostecka, Michael Boutros (2020). Multiplexed conditional genome editing with Cas12a in Drosophila. PNAS September 15, 2020 117 (37) 22890-22899.